Variation data

1. Sample information

Sample_Information.xlsx  (384KB)
This file contains information on all 3028 sequenced Saccharomyces cerevisiae strains ever published.

2. Filtered SNPs

Sc_2606_onlyGT.vcf.gz  (235.22MB)
Sc_2606_onlyGT.vcf.gz.tbi  (8KB)
This file contains all SNP variation after GT filtering: only high-quality genotype (GT) information is retained, which is suitable for research that requires precise variation sites.
.tbi file is the corresponding variation index file.

Sc_2606_maf.vcf.gz  (87.58MB)
Sc_2606_maf.vcf.gz.tbi  (8KB)
This file contains high-quality SNP variation data that has been filtered by GT and contains only 2 minor alleles, whitch is suitable for studies with strict requirements on high-quality variation sites.
.tbi file is the corresponding variation index file.

3. VCF files

Sc.sample2606.SNP.vcf.gz    (56.40GB) Sc.sample2606.SNP.vcf.gz.tbi    (9KB)
Sc.sample2606.INDEL.vcf.gz    (3.87GB) Sc.sample2606.INDEL.vcf.gz.tbi    (9KB)
These files are the original mutation data without any processing.
.tbi file is the corresponding variation index file.